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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877120.1_cds_XP_016436369.1_32236
CDS Infomation

[gene=LOC107762525] [db_xref=GeneID:107762525] [protein=probable protein phosphatase 2C 11] [protein_id=XP_016436369.1] [location=complement(join(25239..25367,26164..26235,28432..28523,29115..29201,32541..32699,32794..32892,33066..33208,34620..34831))] [gbkey=CDS]
Sequence

ATGATGAACGTTGACAAGAAAGAATCCGATCGTAACCTTCCAGAACTTTCTCCACCGTCC
ATGGAGAACCATCCACCGGCACCGGCAGCGACACCGTCACGGAAACCACCAAAAGAACCT
ACTGCGCCGCCGCAGATGAAACAGTCGCCGTCAACAACTGTCATGATTCCTTCTATTGAT
CCCAATGCCCTCTTTAGCGGCGGCGGTATTAGCTTTCTGACTGGAAACAAAAGTGCTAAA
TTCAGCTACGGATATGCTAGTTTTAAGGGGAAACGGGCTTCCATGGAGGACTTTTATGAG
ACAAGGATATCAGAAGTCGAAGGTCAAATGGTGGCATTCTTTGGTGTTTTTGACGGTCAC
GGTGGTTCAAGAACAGCAGAATACCTGAAGAACAACCTCTTTAAGAATTTGAGTGGTCAT
CCTGATTTTATCAAAGATACGAAGTCAGCTATAGTTGAAGCATTTAAGCAGACCGACGCC
GATTACCTTAATGAAGAAAAAGGCCAGCAAAAAGATGCTGGTTCAACAGCATCAACTGCT
GTTCTTATAGGTGATAGATTGGTTGTTGCAAATGTGGGAGACTCTAGAGTCGTCGCTTGT
AGAGATGGTTCAGCTATTCCTTTATCCATCGATCACAAGCCTGACAGATCTGATGAGCGT
GAAAGGATAGAACAGGCTGGCGGTTTCATCATCTGGGCAGGTACATGGCGTGTAGGTGGG
GTACTGGCTGTTTCTCGTGCATTTGGAGATAAACTGCTAAAGCCATATGTTGTGGCAGAC
CCAGAGATTCAGGAAGAAGAAATTGATGGTGTAGATTTTATAATAATTGCAAGTGATGGA
CTTTGGAATGTCCTGTCTAACAAGGATGCTGTGGCCATCGTGCAGGACATAAAAGATGCT
GAAGCAGCATCACGTAAGCTTATAGAAGAAGCTTATTCAAGGGGTAGTTCTGACAACATC
ACCTGTGTAGTTGTTCGATTTGAGAGCGCATGA

Peptide Sequence

PEP ID

XP_016436369.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 11 [Nicotiana tabacum]
Sequence

MMNVDKKESDRNLPELSPPSMENHPPAPAATPSRKPPKEPTAPPQMKQSPSTTVMIPSID
PNALFSGGGISFLTGNKSAKFSYGYASFKGKRASMEDFYETRISEVEGQMVAFFGVFDGH
GGSRTAEYLKNNLFKNLSGHPDFIKDTKSAIVEAFKQTDADYLNEEKGQQKDAGSTASTA
VLIGDRLVVANVGDSRVVACRDGSAIPLSIDHKPDRSDERERIEQAGGFIIWAGTWRVGG
VLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVLSNKDAVAIVQDIKDA
EAASRKLIEEAYSRGSSDNITCVVVRFESA

Transcript Sequence

Gene sequence data has not been registered.